Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886678.1_cds_XP_016440818.1_36238
CDS Infomation

[gene=LOC107766537] [db_xref=GeneID:107766537] [protein=B3 domain-containing protein Os01g0723500-like isoform X4] [protein_id=XP_016440818.1] [location=complement(join(13715..14029,15462..15625,15716..15833,15930..16199,16823..16968,17822..18362,19614..19625))] [gbkey=CDS]
Sequence

ATGCAGAAATTGAAAATTCCATCAAAATTCATTAAACATATGGAAGGAAGAGCTTCTGGA
ACAGCATTTTTGGTGGGTCCCAGTGGTAATTCTTGGCCTATGGACTTAATACAGCAAGAT
GATGGTTTATTCTTCCACAATGGATGGGCTTCATTTGTTAAGGATCACTGCCTTGAAAGT
GGGGATGCTTTGGTTTTCAGATATGACGGTGATTTGCATTTCACTGTGCTAGCATTTGAT
GAAAGTTCATGTGAGAAGGAAGCTGCTTATAACGCTGACTGCAGTCAAGGAGCAACAAAC
TTGTACAATCTTGCTTTGAAAAAAAGAGACCGAGGAAACTCAGCTTTATTAGATTGCATT
GTTGAAGGTGTTCCTAAGAAAATGCGAAGCACGCAGAGCCCTTCCGAATGCACAGCAGAA
GACGCAGTTTGCTCAAATGGAAGAAGTTATGCTTCTAGCTTTCTGAATGAAATCGAGAAT
GCTGGAAATGCATCAAACAATACAGTTACCATTGCTGTGCCATCTCAAACAGAGATTGTC
TGCAGTAACCCAGAGGTGAAAACAGGCAATGGTACCTCCGAGGAACCTATGTGGTTGTCT
GCACAAGAAGCAGAAAAGGTTGCCCGTTCGTTTACCTCGAGTTTCCCCAACTTTATGAAG
GTTATGAAGAGGTTCAACGTTAGTGGTTCATACACCCTGAACATCCCTTATCAATTTGCC
ACAGAACACCTACCCAAATGCAAGGTGAAGATTTTACTTCACAATTTAAAAGGAAAAACT
TGGACTGTGAATTCAATCCCGACTACAAGAGTACAAACATCACATACCTTTTGCGGAGGT
TGGTTATCCTTTGTTCGTGACAATAACATTGATTTGGGAGATATCTGCATCTTTGAGCTT
GTCCACAAGTGTGAATTACGCGTGCATGTTCTGAGGGTGGAAAAGGAAGGAAATGATTAC
AGTAGTAAGCAGGTAGCAAAGGCCAAGACATATGATAAAAGAGGATCTGCTCATGGCAAA
GAGAAACATGGTAATATGTTGAAGAGTCATCAGCTCCATTTGTCAAAGATTTGCAGTGGA
GATTCAGTAATCAGGAAACCTGCTCAGGTTAAACAGGGTTCTTTCACCAAGAGCTGCATG
TCAATGAAATCAGTACCTGAAGAGAAATTAGCTGCTGAATCTTTCATTTCTAATTTTCCT
CATTTTGTACGAATCATGAAAAAGTTCAATATTAGTGGCTCTTACACTCTGAAAGTTCCA
TATCAGTTCTCAATGGAACACCTCCCAAACTGCAGAACGGAGATCGTGCTTCGTAACTTG
AAAGGAGAATGTTGGACTGTGAATTCAATTCCGACTATGAAGGTACAAACGCTGCACACA
TTTTGCGGAGGATGGTCGGCATTTGTCAGAGATAATGACATTCAGATGGGAGATATCTGC
ATATTTGAGCTGGTTGGGAAATATGAAATGCGTGTACATATATGTGCAATTGGGAAGAAG
GGGTTAGATTACCGGAACGGGATAACTTCTAATGAGTCGGCTATCCTTGCGTCCTTGACA
AGCTAG

Peptide Sequence

PEP ID

XP_016440818.1
PEP Infomation

PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X4 [Nicotiana tabacum]
Sequence

MQKLKIPSKFIKHMEGRASGTAFLVGPSGNSWPMDLIQQDDGLFFHNGWASFVKDHCLES
GDALVFRYDGDLHFTVLAFDESSCEKEAAYNADCSQGATNLYNLALKKRDRGNSALLDCI
VEGVPKKMRSTQSPSECTAEDAVCSNGRSYASSFLNEIENAGNASNNTVTIAVPSQTEIV
CSNPEVKTGNGTSEEPMWLSAQEAEKVARSFTSSFPNFMKVMKRFNVSGSYTLNIPYQFA
TEHLPKCKVKILLHNLKGKTWTVNSIPTTRVQTSHTFCGGWLSFVRDNNIDLGDICIFEL
VHKCELRVHVLRVEKEGNDYSSKQVAKAKTYDKRGSAHGKEKHGNMLKSHQLHLSKICSG
DSVIRKPAQVKQGSFTKSCMSMKSVPEEKLAAESFISNFPHFVRIMKKFNISGSYTLKVP
YQFSMEHLPNCRTEIVLRNLKGECWTVNSIPTMKVQTLHTFCGGWSAFVRDNDIQMGDIC
IFELVGKYEMRVHICAIGKKGLDYRNGITSNESAILASLTS

Transcript Sequence

Gene sequence data has not been registered.